Research Achievements - Original paper -

Multiple myeloma–associated non-crystalline proximal tubulopathy and crystalline cast nephropathy: Biochemical and structural features of disease-causing monoclonal kappa light chains

Toshinori Ezawa, Riku Otomo, Yumi Kariya, Kyoko Nozawa, Sonosuke Kyoya, Chikako Furutani, Keiichi Noguchi, Masafumi Yohda, Masafumi Odaka, Hirotoshi Matsumura, Ayano Saito, Masaya Saito, Fumito Abe, Yuki Fujioka, Akihiro Kitadate, Hideki Wakui, Naoto Takahashi

FASEB Journal ( FASEB Journal )  39 ( 1 ) 1 - 13   2025.01  [Refereed]

Research paper (journal)   Domestic Co-author

DOI

Comparative proteomic analysis of glomerular proteins in IgA nephropathy and IgA vasculitis with nephritis

Kaga H.

Clinical Proteomics ( Clinical Proteomics )  20 ( 1 )   2023.12  [Refereed]

Research paper (journal)   Domestic Co-author

DOI

Comparative proteomic analysis of glomerular proteins in primary and bucillamine-induced membranous nephropathy

Kaga H.

Clinical Proteomics ( Clinical Proteomics )  19 ( 1 )   2022.12  [Refereed]

Research paper (journal)   Domestic Co-author

DOI Repository

Comparative proteomic analysis of renal proteins from IgA nephropathy model mice and control mice

Miyakawa, R., Sato, A., Matsuda, Y., Saito, A., Abe, F., Matsumura, H., Odaka, M., Suzuki, T., Dohmae, N., Komatsuda, A., Takahashi, N., Wakui, H.

Clinical and Experimental Nephrology ( Clinical and Experimental Nephrology )  24 ( 8 ) 666 - 679   2020.08  [Refereed]

Research paper (journal)   Domestic Co-author

DOI

Comparison of measurements of anti-PLA2R antibodies in Japanese patients with membranous nephropathy using in-house and commercial ELISA

Kaga H, Komatsuda A, Yamamoto S, Kikuchi T, Kamata M, Sato A, Odaka M, Yokota SI, Takahashi N, Wakui H

Clinical and Experimental Nephrology   23 ( 4 ) 465 - 473   2019.02  [Refereed]

Research paper (journal)   Domestic Co-author

The transitional transmittance response of ZIF-8 gas adsorption observed using terahertz waves

Matsuoka, A., Matsumura, H., Odaka, M., Ogawa, N., Tanno, T.

e-Journal of Surface Science and Nanotechnology ( e-Journal of Surface Science and Nanotechnology )  16 ( 0 ) 142 - 144   2018.05  [Refereed]

Research paper (journal)   Domestic Co-author

<p>In this study, we recorded the transitional response in terms of terahertz transmittance of zeolitic imidazole framework-8 [Zn(2-methylimidazolate)₂, ZIF-8] at 2.0 THz as a function of exposure time to gaseous propane and <i>n</i>-butane. The transmittance at 2.0 THz increased as gas adsorbed onto the ZIF-8. Conversely, during a nitrogen purge, transmittance decreased as the alkane gas desorbed. We estimated time constants for the adsorption and desorption of the two gases by comparing the plots of their responses. We also demonstrated the potential of using a combination of ZIF materials and terahertz technology as a novel gas analyzer. [DOI: 10.1380/ejssnt.2018.142]</p>

DOI

HSP60 possesses a GTPase activity and mediates protein folding with HSP10

Okamoto, T.a, Yamamoto, H., Kudo, I., Matsumoto, K., Odaka, M., Grave, E., Itoh, H.

Scientific Reports ( Scientific Reports )  7 ( 1 ) 16931   2017.12  [Refereed]

Research paper (journal)   Domestic Co-author

DOI

In Situ Observation of Gas Adsorption onto ZIF-8 Using Terahertz Waves

Tanno, T., Watanabe, Y., Umeno, K., Matsuoka, A., Matsumura, H., Odaka, M., Ogawa, N.

Journal of Physical Chemistry C ( Journal of Physical Chemistry C )  121 ( 33 ) 17921 - 17924   2017.08  [Refereed]

Research paper (journal)   Domestic Co-author

DOI

Improvement of enantioselectivity of the B-type halohydrin hydrogen-halide-lyase from Corynebacterium sp. N-1074

Watanabe F, Yu F, Ohtaki A, Yamanaka Y, Noguchi K, Odaka M, Yohda M

Journal of Bioscience and Bioengineering   122 ( 3 ) 270 - 207   2016.05  [Refereed]

Research paper (journal)   Domestic Co-author

DOI

Catalytic Mechanism of Nitrile Hydratase Subsequent to Cyclic Intermediate Formation: A QM/MM Study

Kayanuma M, Shoji M, Yohda M, Odaka M, Shigeta Y

Journal of Physical Chemistry Part B   120 ( 13 ) 3259 - 3266   2016.04  [Refereed]

Research paper (journal)   Domestic Co-author

Structural and functional characterization of aspartate racemase from the acidothermophilic archaeon Picrophilus torridus

Aihara T, Ito T, Yamanaka Y, Noguchi K, Odaka M, Sekine M, Homma H, Yohda M

Extremophiles   20 ( 4 ) 385 - 393   2016.04  [Refereed]

Research paper (journal)   Domestic Co-author

Crystal structures of halohydrin hydrogen-halide-lyases from Corynebacterium sp. N-1074

Watanabe F, Yu F, Ohtaki A, Yamanaka Y, Noguchi K, Yohda M, Odaka M

Proteins   83 ( 12 ) 2230 - 2239   2015.10  [Refereed]

Research paper (journal)   Domestic Co-author

Time-Resolved Crystallography of the Reaction Intermediate of Nitrile Hydratase: Revealing a Role for the Cysteinesulfenic Acid Ligand as a Catalytic Nucleophile

Yamanaka Y, Kato Y, Hashimoto K, Iida K, Nagasawa K, Nakayama H, Dohmae N, Noguchi K, Noguchi T, Yohda M, Odaka M

Angebandte Chemie International Edition   54 ( 37 ) 10763 - 10767   2015.09  [Refereed]

Research paper (journal)   Domestic Co-author

DOI

NADH oxidase and alkyl hydroperoxide reductase subunit C (peroxiredoxin) from Amphibacillus xylanus form an oligomeric assembly

Arai T, Kimata S, Mochizuki D, Hara K, Zako T, Odaka M, Yohda M, Arisaka F, Kanamaru S, Matsumoto T, Yajima S, Sato J, Kawasaki S, Niimura Y.

FEBS Open Bio   5   124 - 131   2015.02  [Refereed]

Research paper (journal)   Domestic Co-author

Packaging guest proteins into the encapsulin nanocompartment from nanocompartment from Rhodococcus erythropolis N771

Tamura A., Fukutani Y., Takami T., Fujii M., Nakaguchi Y., Murakami Y., Noguchi K., Yohda Y., and Odaka M.

Biotechnology and Bioengineering   112 ( 1 ) 13 - 20   2015.01  [Refereed]

Research paper (journal)   Domestic Co-author

Expression, purification, crystallization and preliminary crystallographic analysis of hepatitis B virus core protein dimerized via a peptide linker containing an EGFP insertion

Kikuchi M., Iwabuchi S., Kikkou T., Noguchi K., Odaka M., Yohda M., Kawata M., Sato C., and Matsumoto O.

Acta Crystallographica. Section F, Structural Biology Communications   69 ( 8 ) 942 - 945   2013.08  [Refereed]

Research paper (journal)   Domestic Co-author

Two arginine residues in the substrate pocket predominantly control the substrate selectivity of thiocyanate hydrolase

Yamanaka Y., Arakawa T., Watanabe T., Namima S., Sato M., Hori S., Ohtaki A., Noguchi K., Katayama Y., Yohda M., and Odaka M.

Journal of Bioscience and Bioengineering   116 ( 1 ) 22 - 27   2013.07  [Refereed]

Research paper (journal)   Domestic Co-author

Crystal structure and functional studies of an unusual L-cysteine desulfurase from Archaeoglobus fulgidus

Yamanaka Y., Zeppieri L., Nicolet Y., Marinoni E.N., de Oliveira J.S., Odaka M., Dean D.R., and Fontecilla-Camps J.C.

Dalton Transactions   42 ( 9 ) 3092 - 3099   2013.03  [Refereed]

Research paper (journal)   Domestic Co-author

Carbonyl sulfide hydrolase from Thiobacillus thioparus strain THI115 is one of the β-carbonic anhydrase family enzymes

Ogawa T., Noguchi K., Saito M., Nagahata Y., Kato H., Ohtaki A., Nakayama H., Dohmae N., Matsushita Y., Odaka M., Yohda M., Nyunoya H., and Katayama Y.

Journal of American Chemical Society   135 ( 10 ) 3818 - 3825   2013.03  [Refereed]

Research paper (journal)   Domestic Co-author

Expression, purification, crystallization and preliminary X-ray crystallographic studies of hepatitis B virus core fusion protein corresponding to octahedral particles

Kikuchi M., Iwabuchi S., Kikkou T., Noguchi K., Odaka M., Yohda M., Kawata M., Sato C., and Matsumoto O.

Acta Crystallographica. Section F, Structural Biology Communications   69 ( 2 ) 165 - 169   2013.02  [Refereed]

Research paper (journal)   Domestic Co-author